Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.58■□□□□ 0.57
VPS11Q9H270 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 ESRRAP1-201ENST00000400596 1257 ntBASIC18.58■□□□□ 0.56
VPS11Q9H270 NIFKP9-201ENST00000419265 221 ntBASIC18.58■□□□□ 0.56
VPS11Q9H270 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS11Q9H270 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.58■□□□□ 0.56
VPS11Q9H270 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VPS11Q9H270 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
VPS11Q9H270 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
VPS11Q9H270 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS11Q9H270 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS11Q9H270 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS11Q9H270 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS11Q9H270 SIRPAP1-201ENST00000448467 1770 ntBASIC18.58■□□□□ 0.56
VPS11Q9H270 AC112777.1-201ENST00000540175 1423 ntBASIC18.57■□□□□ 0.56
VPS11Q9H270 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VPS11Q9H270 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 AC091390.4-202ENST00000476426 537 ntBASIC18.57■□□□□ 0.56
VPS11Q9H270 RPS2P4-201ENST00000476944 856 ntBASIC18.57■□□□□ 0.56
VPS11Q9H270 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
VPS11Q9H270 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 AP002982.1-201ENST00000492365 877 ntBASIC18.57■□□□□ 0.56
VPS11Q9H270 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS11Q9H270 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
VPS11Q9H270 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS11Q9H270 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VPS11Q9H270 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS11Q9H270 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS11Q9H270 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VPS11Q9H270 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
VPS11Q9H270 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
VPS11Q9H270 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.56■□□□□ 0.56
VPS11Q9H270 AC133681.1-201ENST00000465482 601 ntBASIC18.56■□□□□ 0.56
VPS11Q9H270 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
VPS11Q9H270 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
VPS11Q9H270 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VPS11Q9H270 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.56■□□□□ 0.56
VPS11Q9H270 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS11Q9H270 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS11Q9H270 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS11Q9H270 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS11Q9H270 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 HTR7P1-201ENST00000538670 1336 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms