Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 AC005052.1-201ENST00000625181 2492 ntBASIC14.97□□□□□ -0.01
NKX6-2Q9C056 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-2Q9C056 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 AC138028.4-201ENST00000564984 1845 ntBASIC14.96□□□□□ -0.01
NKX6-2Q9C056 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 TSPY26P-202ENST00000565928 3884 ntBASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-2Q9C056 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-2Q9C056 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 AF213884.3-201ENST00000563833 479 ntBASIC14.95□□□□□ -0.02
NKX6-2Q9C056 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms