Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17■□□□□ 0.31
TRIM2Q9C040 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17■□□□□ 0.31
TRIM2Q9C040 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM2Q9C040 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM2Q9C040 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17■□□□□ 0.31
TRIM2Q9C040 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17■□□□□ 0.31
TRIM2Q9C040 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRIM2Q9C040 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM2Q9C040 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17■□□□□ 0.31
TRIM2Q9C040 GPAT2P1-201ENST00000444924 1672 ntBASIC17■□□□□ 0.31
TRIM2Q9C040 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM2Q9C040 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TRIM2Q9C040 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17■□□□□ 0.31
TRIM2Q9C040 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 AC133561.5-201ENST00000635547 218 ntBASIC16.99■□□□□ 0.31
TRIM2Q9C040 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM2Q9C040 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM2Q9C040 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 AC034236.2-201ENST00000606662 1610 ntBASIC16.98■□□□□ 0.31
TRIM2Q9C040 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM2Q9C040 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM2Q9C040 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 UNC93B2-201ENST00000285383 730 ntBASIC16.97■□□□□ 0.31
TRIM2Q9C040 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 MIR3180-5-201ENST00000583743 153 ntBASIC16.97■□□□□ 0.31
TRIM2Q9C040 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms