Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM201B-201ENST00000458407 597 ntBASIC18.46■□□□□ 0.55
CPNE1Q99829 NUDT16P1-203ENST00000513809 620 ntBASIC18.46■□□□□ 0.55
CPNE1Q99829 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.46■□□□□ 0.54
CPNE1Q99829 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE1Q99829 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 FLJ13224-201ENST00000313737 1514 ntBASIC18.45■□□□□ 0.54
CPNE1Q99829 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.45■□□□□ 0.54
CPNE1Q99829 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.45■□□□□ 0.54
CPNE1Q99829 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.45■□□□□ 0.54
CPNE1Q99829 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE1Q99829 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 GNAS-203ENST00000306120 1878 ntBASIC18.45■□□□□ 0.54
CPNE1Q99829 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE1Q99829 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE1Q99829 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE1Q99829 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE1Q99829 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 KRT18P29-201ENST00000397031 1267 ntBASIC18.44■□□□□ 0.54
CPNE1Q99829 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 AC097488.1-201ENST00000507834 756 ntBASIC18.44■□□□□ 0.54
CPNE1Q99829 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.44■□□□□ 0.54
CPNE1Q99829 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPNE1Q99829 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CPNE1Q99829 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPNE1Q99829 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CPNE1Q99829 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE1Q99829 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPNE1Q99829 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.43■□□□□ 0.54
CPNE1Q99829 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.43■□□□□ 0.54
CPNE1Q99829 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 MIR3180-5-201ENST00000583743 153 ntBASIC18.43■□□□□ 0.54
CPNE1Q99829 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.43■□□□□ 0.54
CPNE1Q99829 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CPNE1Q99829 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 AP000997.3-201ENST00000623333 2250 ntBASIC18.43■□□□□ 0.54
CPNE1Q99829 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPNE1Q99829 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE1Q99829 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE1Q99829 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
CPNE1Q99829 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms