Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS1Q99742 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NPAS1Q99742 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 HOXB1-202ENST00000577092 1414 ntBASIC16.79■□□□□ 0.28
NPAS1Q99742 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.79■□□□□ 0.28
NPAS1Q99742 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
NPAS1Q99742 NEK4P2-201ENST00000580004 1012 ntBASIC16.79■□□□□ 0.28
NPAS1Q99742 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NPAS1Q99742 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS1Q99742 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS1Q99742 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS1Q99742 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS1Q99742 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS1Q99742 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS1Q99742 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPAS1Q99742 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS1Q99742 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 AK4P3-201ENST00000418260 669 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 KRT18P38-201ENST00000449496 1282 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 DUX4L26-201ENST00000489078 1255 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 KRT18P41-201ENST00000518924 1277 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS1Q99742 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS1Q99742 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.78■□□□□ 0.28
NPAS1Q99742 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS1Q99742 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS1Q99742 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS1Q99742 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS1Q99742 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.77■□□□□ 0.28
NPAS1Q99742 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS1Q99742 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS1Q99742 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms