Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PRPF18Q99633 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.92■□□□□ 0.46
PRPF18Q99633 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.92■□□□□ 0.46
PRPF18Q99633 AC006058.3-201ENST00000606217 1069 ntBASIC17.92■□□□□ 0.46
PRPF18Q99633 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 HEIH-201ENST00000623091 1652 ntBASIC17.92■□□□□ 0.46
PRPF18Q99633 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
PRPF18Q99633 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRPF18Q99633 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.92■□□□□ 0.46
PRPF18Q99633 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PRPF18Q99633 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.91■□□□□ 0.46
PRPF18Q99633 AC073648.6-201ENST00000641589 218 ntBASIC17.91■□□□□ 0.46
PRPF18Q99633 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PRPF18Q99633 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRPF18Q99633 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.91■□□□□ 0.46
PRPF18Q99633 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 KRT8P11-201ENST00000409686 1436 ntBASIC17.9■□□□□ 0.46
PRPF18Q99633 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.9■□□□□ 0.46
PRPF18Q99633 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PRPF18Q99633 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.9■□□□□ 0.46
PRPF18Q99633 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.9■□□□□ 0.46
PRPF18Q99633 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRPF18Q99633 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 AC004980.1-204ENST00000429707 299 ntBASIC17.9■□□□□ 0.46
PRPF18Q99633 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 HTR7P1-201ENST00000538670 1336 ntBASIC17.9■□□□□ 0.46
PRPF18Q99633 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRPF18Q99633 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PRPF18Q99633 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRPF18Q99633 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms