Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 AC008550.1-201ENST00000511500 884 ntBASIC18.51■□□□□ 0.55
NDNQ99608 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.51■□□□□ 0.55
NDNQ99608 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.51■□□□□ 0.55
NDNQ99608 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.51■□□□□ 0.55
NDNQ99608 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.51■□□□□ 0.55
NDNQ99608 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 AL109659.2-201ENST00000606809 1674 ntBASIC18.5■□□□□ 0.55
NDNQ99608 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NDNQ99608 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.5■□□□□ 0.55
NDNQ99608 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 KRT8P45-201ENST00000414328 1447 ntBASIC18.5■□□□□ 0.55
NDNQ99608 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 HCG11-201ENST00000411553 5696 ntBASIC18.5■□□□□ 0.55
NDNQ99608 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.5■□□□□ 0.55
NDNQ99608 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NDNQ99608 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 AL023284.2-201ENST00000405850 579 ntBASIC18.5■□□□□ 0.55
NDNQ99608 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.5■□□□□ 0.55
NDNQ99608 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.5■□□□□ 0.55
NDNQ99608 AP003071.4-201ENST00000562276 1284 ntBASIC18.5■□□□□ 0.55
NDNQ99608 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.5■□□□□ 0.55
NDNQ99608 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.5■□□□□ 0.55
NDNQ99608 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NDNQ99608 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.5■□□□□ 0.55
NDNQ99608 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.5■□□□□ 0.55
NDNQ99608 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
NDNQ99608 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NDNQ99608 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDNQ99608 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NDNQ99608 PRORSD1P-202ENST00000563365 2154 ntBASIC18.49■□□□□ 0.55
NDNQ99608 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.49■□□□□ 0.55
NDNQ99608 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NDNQ99608 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.49■□□□□ 0.55
NDNQ99608 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.49■□□□□ 0.55
NDNQ99608 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.49■□□□□ 0.55
NDNQ99608 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NDNQ99608 TMEM191A-211ENST00000637163 1067 ntBASIC18.49■□□□□ 0.55
NDNQ99608 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NDNQ99608 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NDNQ99608 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
NDNQ99608 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NDNQ99608 AC099343.3-201ENST00000605834 2503 ntBASIC18.49■□□□□ 0.55
NDNQ99608 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
NDNQ99608 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDNQ99608 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
NDNQ99608 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.48■□□□□ 0.55
NDNQ99608 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
NDNQ99608 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDNQ99608 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.48■□□□□ 0.55
NDNQ99608 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.48■□□□□ 0.55
NDNQ99608 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.48■□□□□ 0.55
NDNQ99608 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms