Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 AL157888.1-201ENST00000631930 593 ntBASIC19.08■□□□□ 0.64
HAPLN3Q96S86 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 AC009102.3-201ENST00000623118 1491 ntBASIC19.08■□□□□ 0.64
HAPLN3Q96S86 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HAPLN3Q96S86 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 AC022616.7-201ENST00000525383 220 ntBASIC19.07■□□□□ 0.64
HAPLN3Q96S86 LINC01238-205ENST00000567549 1107 ntBASIC19.07■□□□□ 0.64
HAPLN3Q96S86 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HAPLN3Q96S86 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 AC092647.4-201ENST00000457211 535 ntBASIC19.06■□□□□ 0.64
HAPLN3Q96S86 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 AL049597.2-201ENST00000565575 961 ntBASIC19.06■□□□□ 0.64
HAPLN3Q96S86 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 NOC2LP1-202ENST00000452600 2235 ntBASIC19.06■□□□□ 0.64
HAPLN3Q96S86 SDHAP2-201ENST00000455183 2001 ntBASIC19.06■□□□□ 0.64
HAPLN3Q96S86 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HAPLN3Q96S86 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 SPDYE15P-201ENST00000424157 909 ntBASIC19.05■□□□□ 0.64
HAPLN3Q96S86 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 PVRIG2P-201ENST00000435460 978 ntBASIC19.05■□□□□ 0.64
HAPLN3Q96S86 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HAPLN3Q96S86 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms