Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF3Q96PU9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF3Q96PU9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ODF3Q96PU9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ODF3Q96PU9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AC138028.4-201ENST00000564984 1845 ntBASIC13.62□□□□□ -0.23
ODF3Q96PU9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 RBM17P1-201ENST00000453646 1190 ntBASIC13.62□□□□□ -0.23
ODF3Q96PU9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 FITM1-202ENST00000559294 800 ntBASIC13.62□□□□□ -0.23
ODF3Q96PU9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AC116562.4-202ENST00000641738 218 ntBASIC13.62□□□□□ -0.23
ODF3Q96PU9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ODF3Q96PU9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ODF3Q96PU9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 KRT18P23-201ENST00000435622 1283 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC008550.1-201ENST00000511500 884 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 AP003041.3-201ENST00000527151 707 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 C2orf69P3-201ENST00000565542 1120 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 Z99916.2-201ENST00000604037 246 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC010653.2-201ENST00000623505 997 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC092338.2-201ENST00000568827 1415 ntBASIC13.61□□□□□ -0.23
ODF3Q96PU9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF3Q96PU9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF3Q96PU9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms