Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 KRT17P1-201ENST00000399211 1546 ntBASIC13.95□□□□□ -0.18
AP1S3Q96PC3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S3Q96PC3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 AC011767.1-201ENST00000617410 1153 ntBASIC13.94□□□□□ -0.18
AP1S3Q96PC3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.94□□□□□ -0.18
AP1S3Q96PC3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S3Q96PC3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 AC068418.2-201ENST00000577309 3703 ntBASIC13.93□□□□□ -0.18
AP1S3Q96PC3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 GPX1P1-201ENST00000388829 606 ntBASIC13.93□□□□□ -0.18
AP1S3Q96PC3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 BID-214ENST00000617586 542 ntTSL 5 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms