Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 AL121832.2-201ENST00000610979 668 ntBASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 AC008694.1-202ENST00000636953 945 ntBASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 FLJ38576-201ENST00000623820 2459 ntBASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM2Q96JY6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.37■□□□□ 0.85
PDLIM2Q96JY6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 AL512625.2-201ENST00000417533 625 ntBASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM2Q96JY6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 AC133963.1-201ENST00000504166 1679 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms