Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 AC011498.5-201ENST00000592027 486 ntBASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 AC126763.1-201ENST00000552015 2118 ntBASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 AC005082.1-201ENST00000413042 2259 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 KRT89P-201ENST00000620027 1478 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 AP003733.1-201ENST00000491725 852 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 AC008687.5-201ENST00000593746 558 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 AC069148.1-201ENST00000608741 768 ntBASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD1Q96GM5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 AC087289.5-201ENST00000586076 3175 ntBASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD1Q96GM5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 RNF126P1-202ENST00000569893 925 ntBASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMARCD1Q96GM5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCD1Q96GM5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms