Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 AL359075.1-203ENST00000462729 1002 ntBASIC21.9■■□□□ 1.1
DDX11Q96FC9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 AL441883.1-201ENST00000566170 1045 ntBASIC21.9■■□□□ 1.1
DDX11Q96FC9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX11Q96FC9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX11Q96FC9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.89■■□□□ 1.1
DDX11Q96FC9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX11Q96FC9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 AP000550.4-202ENST00000639755 178 ntBASIC21.89■■□□□ 1.09
DDX11Q96FC9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX11Q96FC9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX11Q96FC9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX11Q96FC9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX11Q96FC9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 RCC2P3-201ENST00000418112 1537 ntBASIC21.87■■□□□ 1.09
DDX11Q96FC9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.87■■□□□ 1.09
DDX11Q96FC9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.87■■□□□ 1.09
DDX11Q96FC9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX11Q96FC9 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.87■■□□□ 1.09
DDX11Q96FC9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
DDX11Q96FC9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
DDX11Q96FC9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
DDX11Q96FC9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX11Q96FC9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
DDX11Q96FC9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX11Q96FC9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX11Q96FC9 PCED1CP-201ENST00000419887 785 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms