Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM11Q96F44 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM11Q96F44 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.52■□□□□ 0.71
TRIM11Q96F44 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM11Q96F44 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRIM11Q96F44 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 AL163051.1-201ENST00000569214 1512 ntBASIC19.51■□□□□ 0.71
TRIM11Q96F44 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 MIR149-201ENST00000384879 89 ntBASIC19.51■□□□□ 0.71
TRIM11Q96F44 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 KRT18P23-201ENST00000435622 1283 ntBASIC19.51■□□□□ 0.71
TRIM11Q96F44 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 CR769767.2-201ENST00000622735 460 ntBASIC19.51■□□□□ 0.71
TRIM11Q96F44 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM11Q96F44 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM11Q96F44 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 AC009102.3-201ENST00000623118 1491 ntBASIC19.5■□□□□ 0.71
TRIM11Q96F44 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 MIR1238-201ENST00000408483 83 ntBASIC19.5■□□□□ 0.71
TRIM11Q96F44 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 SNORA78-201ENST00000459373 127 ntBASIC19.5■□□□□ 0.71
TRIM11Q96F44 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 AC010653.2-201ENST00000623505 997 ntBASIC19.5■□□□□ 0.71
TRIM11Q96F44 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 ESPNP-201ENST00000270691 2015 ntBASIC19.5■□□□□ 0.71
TRIM11Q96F44 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM11Q96F44 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM11Q96F44 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM11Q96F44 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM11Q96F44 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms