Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 INGX-201ENST00000359239 846 ntBASIC17.74■□□□□ 0.43
UBE2E3Q969T4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
UBE2E3Q969T4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 FAM87A-204ENST00000613235 858 ntBASIC17.74■□□□□ 0.43
UBE2E3Q969T4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2E3Q969T4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 ECEL1P2-202ENST00000465689 757 ntBASIC17.73■□□□□ 0.43
UBE2E3Q969T4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC104390.1-201ENST00000555663 520 ntBASIC17.73■□□□□ 0.43
UBE2E3Q969T4 NEK4P2-201ENST00000580004 1012 ntBASIC17.73■□□□□ 0.43
UBE2E3Q969T4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC009102.3-201ENST00000623118 1491 ntBASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.73■□□□□ 0.43
UBE2E3Q969T4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 AC087499.1-201ENST00000418141 1075 ntBASIC17.72■□□□□ 0.43
UBE2E3Q969T4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 AC145285.6-201ENST00000604632 637 ntBASIC17.72■□□□□ 0.43
UBE2E3Q969T4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBE2E3Q969T4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.71■□□□□ 0.43
UBE2E3Q969T4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms