Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 AC008622.2-201ENST00000617006 1229 ntBASIC16.59■□□□□ 0.25
PTP4A1Q93096 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A1Q93096 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A1Q93096 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.58■□□□□ 0.25
PTP4A1Q93096 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 LINC00896-202ENST00000609602 2128 ntBASIC16.58■□□□□ 0.25
PTP4A1Q93096 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PTP4A1Q93096 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A1Q93096 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
PTP4A1Q93096 AL139384.1-201ENST00000612143 3047 ntBASIC16.58■□□□□ 0.24
PTP4A1Q93096 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 AC026271.3-201ENST00000571884 352 ntBASIC16.58■□□□□ 0.24
PTP4A1Q93096 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A1Q93096 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A1Q93096 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 RPS2P55-201ENST00000397318 883 ntBASIC16.57■□□□□ 0.24
PTP4A1Q93096 FAM207BP-201ENST00000447172 505 ntBASIC16.57■□□□□ 0.24
PTP4A1Q93096 AC107956.1-201ENST00000494359 873 ntBASIC16.57■□□□□ 0.24
PTP4A1Q93096 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 AC011270.2-201ENST00000624293 2550 ntBASIC16.57■□□□□ 0.24
PTP4A1Q93096 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A1Q93096 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A1Q93096 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.56■□□□□ 0.24
PTP4A1Q93096 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms