Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 AL121761.2-201ENST00000598007 1648 ntBASIC12.48□□□□□ -0.41
COPS9Q8WXC6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AC112777.1-201ENST00000540175 1423 ntBASIC12.47□□□□□ -0.41
COPS9Q8WXC6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 RASA4CP-201ENST00000424092 1398 ntBASIC12.47□□□□□ -0.41
COPS9Q8WXC6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 TSPY21P-201ENST00000433481 731 ntBASIC12.47□□□□□ -0.41
COPS9Q8WXC6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AL023806.1-201ENST00000603994 1649 ntBASIC12.47□□□□□ -0.41
COPS9Q8WXC6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS9Q8WXC6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 RARRES2P1-201ENST00000474487 481 ntBASIC12.46□□□□□ -0.41
COPS9Q8WXC6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC12.46□□□□□ -0.41
COPS9Q8WXC6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms