Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 NEK4P2-201ENST00000580004 1012 ntBASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLL1Q8TB92 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 AL137013.1-201ENST00000432946 1228 ntBASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 AC010203.1-204ENST00000548782 407 ntBASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLL1Q8TB92 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 KRT8P7-201ENST00000533003 1432 ntBASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLL1Q8TB92 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 KRT18P41-201ENST00000518924 1277 ntBASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 ESPNP-201ENST00000270691 2015 ntBASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 AC135776.1-201ENST00000319817 2481 ntBASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 AC036111.1-201ENST00000533973 1582 ntBASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLL1Q8TB92 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms