Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 AC099336.1-202ENST00000602961 463 ntBASIC22.67■■□□□ 1.22
RTL9Q8NET4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 AC116562.4-201ENST00000641316 2276 ntBASIC22.66■■□□□ 1.22
RTL9Q8NET4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 AC138894.3-201ENST00000603787 634 ntBASIC22.66■■□□□ 1.22
RTL9Q8NET4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.66■■□□□ 1.22
RTL9Q8NET4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTL9Q8NET4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 MRPL3P1-201ENST00000400109 1033 ntBASIC22.65■■□□□ 1.22
RTL9Q8NET4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTL9Q8NET4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RTL9Q8NET4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 KRT16P4-201ENST00000453883 522 ntBASIC22.64■■□□□ 1.22
RTL9Q8NET4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.64■■□□□ 1.22
RTL9Q8NET4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.22
RTL9Q8NET4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.64■■□□□ 1.22
RTL9Q8NET4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTL9Q8NET4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTL9Q8NET4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTL9Q8NET4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTL9Q8NET4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.64■■□□□ 1.21
RTL9Q8NET4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.64■■□□□ 1.21
RTL9Q8NET4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTL9Q8NET4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.64■■□□□ 1.21
RTL9Q8NET4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTL9Q8NET4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RTL9Q8NET4 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.63■■□□□ 1.21
RTL9Q8NET4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms