Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 LINC01126-201ENST00000623515 1646 ntBASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 AC011498.5-201ENST00000592027 486 ntBASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 AC024563.2-201ENST00000603282 481 ntBASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARHGEF39Q8N4T4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 AL390719.2-201ENST00000606993 987 ntBASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARHGEF39Q8N4T4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 AC004408.2-201ENST00000623613 2777 ntBASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 IGHGP-201ENST00000390555 1178 ntBASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ARHGEF39Q8N4T4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms