Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 RCC2P6-201ENST00000526625 1557 ntBASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 SLC25A6P5-201ENST00000435663 894 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AL160286.2-201ENST00000567150 934 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 MTMR9LP-203ENST00000426597 1545 ntBASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CRLF3Q8IUI8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRLF3Q8IUI8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms