Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.57■■□□□ 1.2
USP48Q86UV5 TOB2P1-201ENST00000469761 992 ntBASIC22.57■■□□□ 1.2
USP48Q86UV5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.57■■□□□ 1.2
USP48Q86UV5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.57■■□□□ 1.2
USP48Q86UV5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
USP48Q86UV5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.57■■□□□ 1.2
USP48Q86UV5 AL157888.1-201ENST00000631930 593 ntBASIC22.57■■□□□ 1.2
USP48Q86UV5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 AL049812.1-201ENST00000432563 2267 ntBASIC22.57■■□□□ 1.2
USP48Q86UV5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.56■■□□□ 1.2
USP48Q86UV5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 AL161938.1-201ENST00000569833 2180 ntBASIC22.56■■□□□ 1.2
USP48Q86UV5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
USP48Q86UV5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.56■■□□□ 1.2
USP48Q86UV5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.56■■□□□ 1.2
USP48Q86UV5 RNF126P1-202ENST00000569893 925 ntBASIC22.56■■□□□ 1.2
USP48Q86UV5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.56■■□□□ 1.2
USP48Q86UV5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.56■■□□□ 1.2
USP48Q86UV5 AC139530.3-201ENST00000620344 690 ntBASIC22.56■■□□□ 1.2
USP48Q86UV5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
USP48Q86UV5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
USP48Q86UV5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.56■■□□□ 1.2
USP48Q86UV5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.56■■□□□ 1.2
USP48Q86UV5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP48Q86UV5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 AC036111.1-201ENST00000533973 1582 ntBASIC22.55■■□□□ 1.2
USP48Q86UV5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.55■■□□□ 1.2
USP48Q86UV5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 MIR662-201ENST00000384847 95 ntBASIC22.55■■□□□ 1.2
USP48Q86UV5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
USP48Q86UV5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 AL662844.1-201ENST00000546340 181 ntBASIC22.55■■□□□ 1.2
USP48Q86UV5 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.55■■□□□ 1.2
USP48Q86UV5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
USP48Q86UV5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
USP48Q86UV5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.55■■□□□ 1.2
USP48Q86UV5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
USP48Q86UV5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP48Q86UV5 AC007613.1-201ENST00000572811 2597 ntBASIC22.54■■□□□ 1.2
USP48Q86UV5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.54■■□□□ 1.2
USP48Q86UV5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.54■■□□□ 1.2
USP48Q86UV5 SEC1P-202ENST00000473944 940 ntBASIC22.54■■□□□ 1.2
USP48Q86UV5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.54■■□□□ 1.2
USP48Q86UV5 AC012615.1-201ENST00000565797 1299 ntBASIC22.54■■□□□ 1.2
USP48Q86UV5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.54■■□□□ 1.2
USP48Q86UV5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USP48Q86UV5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
USP48Q86UV5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP48Q86UV5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
USP48Q86UV5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
USP48Q86UV5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USP48Q86UV5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP48Q86UV5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms