Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AD000864.1-201ENST00000624076 2295 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AL096828.2-201ENST00000567259 1965 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AC006116.8-202ENST00000587620 1550 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 ZNRF2P3-201ENST00000424200 374 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 POU5F1P3-201ENST00000428824 1078 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AF201337.1-201ENST00000520239 748 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 PCDHA12-202ENST00000613593 2588 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AC124067.4-201ENST00000519691 2379 ntBASIC18.74■□□□□ 0.59
CROCCP2Q86T23 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP2Q86T23 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 GMCL1P1-201ENST00000463439 1581 ntBASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.73■□□□□ 0.59
CROCCP2Q86T23 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP2Q86T23 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AC092368.3-202ENST00000574180 1591 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AP000593.1-201ENST00000393668 712 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 PRSS44-201ENST00000515154 1146 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 C1QL1P1-201ENST00000568105 661 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 HLA-B-256ENST00000639848 1089 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 AC099398.1-201ENST00000567919 2776 ntBASIC18.72■□□□□ 0.59
CROCCP2Q86T23 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP2Q86T23 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CROCCP2Q86T23 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CROCCP2Q86T23 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
CROCCP2Q86T23 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
CROCCP2Q86T23 OR6D1P-203ENST00000641209 4860 ntBASIC18.71■□□□□ 0.59
CROCCP2Q86T23 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms