Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 MTMR9LP-203ENST00000426597 1545 ntBASIC12.8□□□□□ -0.36
CSMD3Q7Z407 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD3Q7Z407 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AC004817.3-201ENST00000602957 2129 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AL596442.2-201ENST00000610240 980 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 KRT8P32-201ENST00000512863 1461 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 TP73-AS1-210ENST00000637775 1455 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 AC125634.1-201ENST00000438758 1403 ntBASIC12.79□□□□□ -0.36
CSMD3Q7Z407 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD3Q7Z407 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 DNAJB3-201ENST00000446806 729 ntBASIC12.78□□□□□ -0.36
CSMD3Q7Z407 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 MTDHP3-201ENST00000594186 672 ntBASIC12.78□□□□□ -0.36
CSMD3Q7Z407 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 UNC93B6-202ENST00000528242 690 ntBASIC12.78□□□□□ -0.36
CSMD3Q7Z407 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD3Q7Z407 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CSMD3Q7Z407 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms