Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 AC145285.3-201ENST00000564603 959 ntBASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 AC011467.2-201ENST00000598425 242 ntBASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 AL138831.2-201ENST00000606564 490 ntBASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 AC009154.2-201ENST00000621177 724 ntBASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNKSR3Q6P9H4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNKSR3Q6P9H4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 AP005117.1-201ENST00000584346 1413 ntBASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 IGHV3-22-201ENST00000520721 359 ntBASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 AC021087.4-201ENST00000563761 564 ntBASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNKSR3Q6P9H4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
CNKSR3Q6P9H4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNKSR3Q6P9H4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
CNKSR3Q6P9H4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 MTCL1P1-201ENST00000446207 792 ntBASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms