Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.84■□□□□ 0.61
CASC4Q6P4E1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 MESTP1-201ENST00000404287 994 ntBASIC18.84■□□□□ 0.61
CASC4Q6P4E1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 AC008556.1-201ENST00000610908 2040 ntBASIC18.84■□□□□ 0.61
CASC4Q6P4E1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
CASC4Q6P4E1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 KRT8P45-201ENST00000414328 1447 ntBASIC18.83■□□□□ 0.61
CASC4Q6P4E1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.83■□□□□ 0.61
CASC4Q6P4E1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 AL162741.1-201ENST00000565563 1558 ntBASIC18.83■□□□□ 0.6
CASC4Q6P4E1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASC4Q6P4E1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms