Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1Q5Y7H0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 CROCCP3-202ENST00000420820 1947 ntBASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1Q5Y7H0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA1Q5Y7H0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 AL031598.1-201ENST00000561511 1773 ntBASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 RNF152P1-201ENST00000397754 604 ntBASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC092647.4-201ENST00000457211 535 ntBASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 YBX1P2-201ENST00000489612 999 ntBASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC034232.1-201ENST00000506026 1064 ntBASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1Q5Y7H0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC117947.1-201ENST00000427448 529 ntBASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 KRT18P41-201ENST00000518924 1277 ntBASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 LINC01238-205ENST00000567549 1107 ntBASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms