Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 AL096828.2-201ENST00000567259 1965 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.16■□□□□ 0.66
LRRC38Q5VT99 EGLN1P1-201ENST00000531623 762 ntBASIC19.16■□□□□ 0.66
LRRC38Q5VT99 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC38Q5VT99 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 SNORA78-201ENST00000459373 127 ntBASIC19.15■□□□□ 0.66
LRRC38Q5VT99 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 AL355075.4-201ENST00000554988 638 ntBASIC19.15■□□□□ 0.66
LRRC38Q5VT99 AC104390.1-201ENST00000555663 520 ntBASIC19.15■□□□□ 0.66
LRRC38Q5VT99 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC38Q5VT99 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC38Q5VT99 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.14■□□□□ 0.66
LRRC38Q5VT99 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC38Q5VT99 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 AC112497.1-201ENST00000624824 639 ntBASIC19.14■□□□□ 0.65
LRRC38Q5VT99 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 LETM1P2-201ENST00000597330 2178 ntBASIC19.14■□□□□ 0.65
LRRC38Q5VT99 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC38Q5VT99 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms