Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 AL163051.1-201ENST00000569214 1512 ntBASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.03■■■□□ 2.4
SNAPC4Q5SXM2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 MTMR9LP-203ENST00000426597 1545 ntBASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 MIR4469-201ENST00000583919 79 ntBASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC30.02■■■□□ 2.4
SNAPC4Q5SXM2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC30.01■■■□□ 2.4
SNAPC4Q5SXM2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNAPC4Q5SXM2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC30■■■□□ 2.39
SNAPC4Q5SXM2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 SPCS2P1-201ENST00000561636 679 ntBASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 MTCL1P1-201ENST00000446207 792 ntBASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 AC027612.4-201ENST00000605371 583 ntBASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
SNAPC4Q5SXM2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 MIR149-201ENST00000384879 89 ntBASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 KRT18P2-201ENST00000447938 1258 ntBASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 AC108751.1-201ENST00000490852 363 ntBASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms