Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL499627.1-201ENST00000569373 2188 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNFT1Q5M7Z0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 IGHV3-47-201ENST00000425060 335 ntBASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 FDX1P1-201ENST00000449115 551 ntBASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 KRT17P6-201ENST00000453795 1220 ntBASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 GUSBP12-201ENST00000513727 720 ntBASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 AL121772.3-201ENST00000610840 674 ntBASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNFT1Q5M7Z0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AIRN-201ENST00000601203 4374 ntBASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 MIR149-201ENST00000384879 89 ntBASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 FAAHP1-202ENST00000446499 1238 ntBASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AC099336.1-202ENST00000602961 463 ntBASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNFT1Q5M7Z0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 Z69720.1-201ENST00000601483 472 ntBASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 SDHAP2-201ENST00000455183 2001 ntBASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNFT1Q5M7Z0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms