Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 GRAMD4P2-201ENST00000423297 1097 ntBASIC9.29□□□□□ -0.92
LINC01554Q52M75 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 MIR4767-201ENST00000582827 78 ntBASIC9.29□□□□□ -0.92
LINC01554Q52M75 AC008764.7-201ENST00000593779 1081 ntBASIC9.29□□□□□ -0.92
LINC01554Q52M75 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 SF1-220ENST00000626028 704 ntTSL 2 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 AC009237.3-201ENST00000393279 1427 ntBASIC9.29□□□□□ -0.92
LINC01554Q52M75 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
LINC01554Q52M75 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
LINC01554Q52M75 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 BID-203ENST00000399765 1879 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 AC105233.4-201ENST00000642045 216 ntBASIC9.28□□□□□ -0.92
LINC01554Q52M75 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC01554Q52M75 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC9.28□□□□□ -0.92
LINC01554Q52M75 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC9.27□□□□□ -0.92
LINC01554Q52M75 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC01554Q52M75 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC01554Q52M75 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC01554Q52M75 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
LINC01554Q52M75 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
LINC01554Q52M75 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
LINC01554Q52M75 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
LINC01554Q52M75 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC01554Q52M75 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01554Q52M75 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
LINC01554Q52M75 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms