Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USH1GQ495M9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
USH1GQ495M9 ANO7L1-203ENST00000602586 1720 ntBASIC21.15■□□□□ 0.98
USH1GQ495M9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.15■□□□□ 0.98
USH1GQ495M9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USH1GQ495M9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.14■□□□□ 0.97
USH1GQ495M9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.14■□□□□ 0.97
USH1GQ495M9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 AP002414.4-201ENST00000589764 1148 ntBASIC21.14■□□□□ 0.97
USH1GQ495M9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.14■□□□□ 0.97
USH1GQ495M9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.14■□□□□ 0.97
USH1GQ495M9 AC092329.2-201ENST00000598402 547 ntBASIC21.14■□□□□ 0.97
USH1GQ495M9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.14■□□□□ 0.97
USH1GQ495M9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USH1GQ495M9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 AC009102.3-201ENST00000623118 1491 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 AC112777.1-201ENST00000540175 1423 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.13■□□□□ 0.97
USH1GQ495M9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
USH1GQ495M9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 MIR149-201ENST00000384879 89 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.13■□□□□ 0.97
USH1GQ495M9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.13■□□□□ 0.97
USH1GQ495M9 CHCHD2P8-201ENST00000429873 447 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 MIR3180-1-201ENST00000580374 94 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 MIR3180-3-201ENST00000584616 94 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.13■□□□□ 0.97
USH1GQ495M9 AL390719.2-201ENST00000606993 987 ntBASIC21.13■□□□□ 0.97
USH1GQ495M9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.13■□□□□ 0.97
USH1GQ495M9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
USH1GQ495M9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
USH1GQ495M9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USH1GQ495M9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.13■□□□□ 0.97
USH1GQ495M9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
USH1GQ495M9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 KRT18P1-202ENST00000452408 1331 ntBASIC21.12■□□□□ 0.97
USH1GQ495M9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USH1GQ495M9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USH1GQ495M9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.12■□□□□ 0.97
USH1GQ495M9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.12■□□□□ 0.97
USH1GQ495M9 DUSP5P1-201ENST00000441325 1139 ntBASIC21.12■□□□□ 0.97
USH1GQ495M9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USH1GQ495M9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.12■□□□□ 0.97
USH1GQ495M9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.12■□□□□ 0.97
USH1GQ495M9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.12■□□□□ 0.97
USH1GQ495M9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USH1GQ495M9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
USH1GQ495M9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.11■□□□□ 0.97
USH1GQ495M9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.11■□□□□ 0.97
USH1GQ495M9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USH1GQ495M9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.11■□□□□ 0.97
USH1GQ495M9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.11■□□□□ 0.97
USH1GQ495M9 IGHGP-201ENST00000390555 1178 ntBASIC21.11■□□□□ 0.97
USH1GQ495M9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.11■□□□□ 0.97
USH1GQ495M9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.11■□□□□ 0.97
USH1GQ495M9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.11■□□□□ 0.97
USH1GQ495M9 GPR32P1-201ENST00000601788 811 ntBASIC21.11■□□□□ 0.97
USH1GQ495M9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.11■□□□□ 0.97
USH1GQ495M9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USH1GQ495M9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USH1GQ495M9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.1■□□□□ 0.97
USH1GQ495M9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.1■□□□□ 0.97
USH1GQ495M9 AP000974.1-201ENST00000623909 2387 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms