Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC30.67■■■□□ 2.5
TOP2BQ02880 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
TOP2BQ02880 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOP2BQ02880 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC30.67■■■□□ 2.5
TOP2BQ02880 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC30.67■■■□□ 2.5
TOP2BQ02880 MYLKP1-201ENST00000509077 1580 ntBASIC30.67■■■□□ 2.5
TOP2BQ02880 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
TOP2BQ02880 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC30.66■■■□□ 2.5
TOP2BQ02880 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC30.66■■■□□ 2.5
TOP2BQ02880 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC30.66■■■□□ 2.5
TOP2BQ02880 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC30.66■■■□□ 2.5
TOP2BQ02880 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
TOP2BQ02880 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC30.66■■■□□ 2.5
TOP2BQ02880 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC30.66■■■□□ 2.5
TOP2BQ02880 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2BQ02880 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
TOP2BQ02880 AC009533.2-201ENST00000543664 586 ntBASIC30.65■■■□□ 2.5
TOP2BQ02880 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC30.65■■■□□ 2.5
TOP2BQ02880 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC30.65■■■□□ 2.5
TOP2BQ02880 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC30.65■■■□□ 2.5
TOP2BQ02880 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC30.65■■■□□ 2.5
TOP2BQ02880 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TOP2BQ02880 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC30.65■■■□□ 2.5
TOP2BQ02880 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC30.65■■■□□ 2.5
TOP2BQ02880 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC30.65■■■□□ 2.5
TOP2BQ02880 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC30.65■■■□□ 2.5
TOP2BQ02880 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2BQ02880 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC30.65■■■□□ 2.5
TOP2BQ02880 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
TOP2BQ02880 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC30.64■■■□□ 2.5
TOP2BQ02880 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
TOP2BQ02880 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2BQ02880 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2BQ02880 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2BQ02880 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2BQ02880 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC30.64■■■□□ 2.5
TOP2BQ02880 CSF3-203ENST00000394148 622 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2BQ02880 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC30.64■■■□□ 2.5
TOP2BQ02880 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
TOP2BQ02880 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC30.64■■■□□ 2.5
TOP2BQ02880 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC30.64■■■□□ 2.5
TOP2BQ02880 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC30.64■■■□□ 2.5
TOP2BQ02880 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC30.64■■■□□ 2.5
TOP2BQ02880 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC30.64■■■□□ 2.5
TOP2BQ02880 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2BQ02880 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2BQ02880 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2BQ02880 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2BQ02880 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2BQ02880 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2BQ02880 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2BQ02880 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2BQ02880 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2BQ02880 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
TOP2BQ02880 MTCL1P1-201ENST00000446207 792 ntBASIC30.63■■■□□ 2.49
TOP2BQ02880 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2BQ02880 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2BQ02880 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
TOP2BQ02880 LINC01126-201ENST00000623515 1646 ntBASIC30.63■■■□□ 2.49
TOP2BQ02880 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2BQ02880 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2BQ02880 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2BQ02880 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC30.62■■■□□ 2.49
TOP2BQ02880 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2BQ02880 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2BQ02880 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 PIN1-206ENST00000587625 878 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 MTDHP3-201ENST00000594186 672 ntBASIC30.62■■■□□ 2.49
TOP2BQ02880 ADK-206ENST00000541550 2222 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
TOP2BQ02880 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2BQ02880 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2BQ02880 AC021087.4-201ENST00000563761 564 ntBASIC30.62■■■□□ 2.49
TOP2BQ02880 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2BQ02880 AC025062.2-201ENST00000605477 670 ntBASIC30.62■■■□□ 2.49
TOP2BQ02880 AP005117.1-201ENST00000584346 1413 ntBASIC30.62■■■□□ 2.49
TOP2BQ02880 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC30.61■■■□□ 2.49
TOP2BQ02880 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC30.61■■■□□ 2.49
TOP2BQ02880 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.61■■■□□ 2.49
TOP2BQ02880 CYGB-205ENST00000590175 830 ntTSL 3 BASIC30.61■■■□□ 2.49
TOP2BQ02880 AL139288.1-201ENST00000623748 933 ntBASIC30.61■■■□□ 2.49
TOP2BQ02880 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2BQ02880 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms