Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 ABALON-201ENST00000629058 1903 ntBASIC20.59■□□□□ 0.89
ASIC1P78348 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.59■□□□□ 0.89
ASIC1P78348 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.59■□□□□ 0.89
ASIC1P78348 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ASIC1P78348 AC128688.1-201ENST00000487626 519 ntBASIC20.59■□□□□ 0.89
ASIC1P78348 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.59■□□□□ 0.89
ASIC1P78348 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ASIC1P78348 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ASIC1P78348 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 AC135776.1-201ENST00000319817 2481 ntBASIC20.58■□□□□ 0.89
ASIC1P78348 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.58■□□□□ 0.89
ASIC1P78348 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.58■□□□□ 0.89
ASIC1P78348 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.58■□□□□ 0.89
ASIC1P78348 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
ASIC1P78348 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ASIC1P78348 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.58■□□□□ 0.88
ASIC1P78348 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.58■□□□□ 0.88
ASIC1P78348 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.58■□□□□ 0.88
ASIC1P78348 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ASIC1P78348 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.58■□□□□ 0.88
ASIC1P78348 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
ASIC1P78348 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ASIC1P78348 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 ECEL1P2-202ENST00000465689 757 ntBASIC20.57■□□□□ 0.88
ASIC1P78348 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 HOXB1-202ENST00000577092 1414 ntBASIC20.57■□□□□ 0.88
ASIC1P78348 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.57■□□□□ 0.88
ASIC1P78348 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ASIC1P78348 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ASIC1P78348 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
ASIC1P78348 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 AC018470.1-201ENST00000624790 3129 ntBASIC20.56■□□□□ 0.88
ASIC1P78348 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ASIC1P78348 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ASIC1P78348 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 FAM87A-204ENST00000613235 858 ntBASIC20.56■□□□□ 0.88
ASIC1P78348 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ASIC1P78348 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 ESPNP-201ENST00000270691 2015 ntBASIC20.56■□□□□ 0.88
ASIC1P78348 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ASIC1P78348 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms