Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDC42P60953 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC42P60953 CROCCP1-201ENST00000426910 5675 ntBASIC16.88■□□□□ 0.29
CDC42P60953 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC42P60953 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.88■□□□□ 0.29
CDC42P60953 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.88■□□□□ 0.29
CDC42P60953 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 SOX15-203ENST00000570788 1093 ntBASIC16.88■□□□□ 0.29
CDC42P60953 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDC42P60953 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC42P60953 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CDC42P60953 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDC42P60953 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CDC42P60953 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDC42P60953 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDC42P60953 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDC42P60953 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDC42P60953 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.87■□□□□ 0.29
CDC42P60953 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.87■□□□□ 0.29
CDC42P60953 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.87■□□□□ 0.29
CDC42P60953 AC004264.1-201ENST00000608354 794 ntBASIC16.87■□□□□ 0.29
CDC42P60953 AL121832.2-201ENST00000610979 668 ntBASIC16.87■□□□□ 0.29
CDC42P60953 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.87■□□□□ 0.29
CDC42P60953 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDC42P60953 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDC42P60953 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.87■□□□□ 0.29
CDC42P60953 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42P60953 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.87■□□□□ 0.29
CDC42P60953 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
CDC42P60953 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 MYLKP1-201ENST00000509077 1580 ntBASIC16.86■□□□□ 0.29
CDC42P60953 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
CDC42P60953 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.86■□□□□ 0.29
CDC42P60953 AC026185.1-201ENST00000445748 174 ntBASIC16.86■□□□□ 0.29
CDC42P60953 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.86■□□□□ 0.29
CDC42P60953 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.86■□□□□ 0.29
CDC42P60953 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CDC42P60953 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC42P60953 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDC42P60953 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC42P60953 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDC42P60953 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDC42P60953 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42P60953 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42P60953 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms