Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH12P55289 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 AC112777.1-201ENST00000540175 1423 ntBASIC17.21■□□□□ 0.35
CDH12P55289 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 AL357033.4-201ENST00000617703 1807 ntBASIC17.21■□□□□ 0.35
CDH12P55289 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH12P55289 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH12P55289 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 AC004951.3-201ENST00000418645 1148 ntBASIC17.21■□□□□ 0.35
CDH12P55289 FAM201B-201ENST00000458407 597 ntBASIC17.21■□□□□ 0.35
CDH12P55289 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 AF186192.3-201ENST00000583427 947 ntBASIC17.21■□□□□ 0.35
CDH12P55289 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH12P55289 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH12P55289 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH12P55289 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDH12P55289 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.21■□□□□ 0.34
CDH12P55289 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDH12P55289 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH12P55289 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH12P55289 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH12P55289 RARRES2P10-201ENST00000564312 460 ntBASIC17.2■□□□□ 0.34
CDH12P55289 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH12P55289 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH12P55289 AL359736.2-201ENST00000621992 437 ntBASIC17.2■□□□□ 0.34
CDH12P55289 AL031985.4-201ENST00000642138 673 ntBASIC17.2■□□□□ 0.34
CDH12P55289 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
CDH12P55289 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CDH12P55289 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH12P55289 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH12P55289 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH12P55289 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH12P55289 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDH12P55289 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH12P55289 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDH12P55289 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH12P55289 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH12P55289 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH12P55289 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CDH12P55289 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.19■□□□□ 0.34
CDH12P55289 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH12P55289 AC073195.1-201ENST00000607241 877 ntBASIC17.19■□□□□ 0.34
CDH12P55289 AC011298.2-201ENST00000617989 482 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms