Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LIMK2P53671 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
LIMK2P53671 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.61■□□□□ 0.57
LIMK2P53671 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.61■□□□□ 0.57
LIMK2P53671 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.61■□□□□ 0.57
LIMK2P53671 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
LIMK2P53671 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
LIMK2P53671 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.61■□□□□ 0.57
LIMK2P53671 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LIMK2P53671 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.61■□□□□ 0.57
LIMK2P53671 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 CCR12P-201ENST00000446203 998 ntBASIC18.61■□□□□ 0.57
LIMK2P53671 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
LIMK2P53671 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.61■□□□□ 0.57
LIMK2P53671 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LIMK2P53671 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LIMK2P53671 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 HMGA1P5-201ENST00000412453 271 ntBASIC18.6■□□□□ 0.57
LIMK2P53671 SLC25A1P2-201ENST00000430693 912 ntBASIC18.6■□□□□ 0.57
LIMK2P53671 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.6■□□□□ 0.57
LIMK2P53671 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LIMK2P53671 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.6■□□□□ 0.57
LIMK2P53671 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.6■□□□□ 0.57
LIMK2P53671 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
LIMK2P53671 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
LIMK2P53671 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LIMK2P53671 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LIMK2P53671 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.59■□□□□ 0.57
LIMK2P53671 AC135776.1-201ENST00000319817 2481 ntBASIC18.59■□□□□ 0.57
LIMK2P53671 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.59■□□□□ 0.57
LIMK2P53671 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LIMK2P53671 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
LIMK2P53671 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.59■□□□□ 0.57
LIMK2P53671 AC006011.2-201ENST00000621313 1158 ntBASIC18.59■□□□□ 0.57
LIMK2P53671 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.59■□□□□ 0.57
LIMK2P53671 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.59■□□□□ 0.57
LIMK2P53671 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.59■□□□□ 0.57
LIMK2P53671 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.59■□□□□ 0.57
LIMK2P53671 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LIMK2P53671 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.58■□□□□ 0.57
LIMK2P53671 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
LIMK2P53671 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LIMK2P53671 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LIMK2P53671 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LIMK2P53671 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.58■□□□□ 0.57
LIMK2P53671 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LIMK2P53671 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms