Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC3P51654 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GPC3P51654 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.35■□□□□ 0.85
GPC3P51654 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC3P51654 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GPC3P51654 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.35■□□□□ 0.85
GPC3P51654 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GPC3P51654 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GPC3P51654 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GPC3P51654 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.34■□□□□ 0.85
GPC3P51654 KRT126P-201ENST00000549467 1181 ntBASIC20.34■□□□□ 0.85
GPC3P51654 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 MIR3180-1-201ENST00000580374 94 ntBASIC20.34■□□□□ 0.85
GPC3P51654 MIR3180-3-201ENST00000584616 94 ntBASIC20.34■□□□□ 0.85
GPC3P51654 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.34■□□□□ 0.85
GPC3P51654 AL020996.1-203ENST00000536896 2307 ntBASIC20.34■□□□□ 0.85
GPC3P51654 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
GPC3P51654 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC3P51654 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GPC3P51654 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.34■□□□□ 0.85
GPC3P51654 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GPC3P51654 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC3P51654 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 AC120498.9-201ENST00000339021 3867 ntBASIC20.33■□□□□ 0.85
GPC3P51654 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 TSPY22P-201ENST00000427496 604 ntBASIC20.33■□□□□ 0.85
GPC3P51654 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC3P51654 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.33■□□□□ 0.85
GPC3P51654 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC3P51654 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.33■□□□□ 0.85
GPC3P51654 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC3P51654 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
GPC3P51654 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC3P51654 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.33■□□□□ 0.84
GPC3P51654 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC3P51654 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.33■□□□□ 0.84
GPC3P51654 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
GPC3P51654 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
GPC3P51654 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.32■□□□□ 0.84
GPC3P51654 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.32■□□□□ 0.84
GPC3P51654 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.32■□□□□ 0.84
GPC3P51654 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.32■□□□□ 0.84
GPC3P51654 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.32■□□□□ 0.84
GPC3P51654 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GPC3P51654 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GPC3P51654 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GPC3P51654 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC3P51654 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC3P51654 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC3P51654 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 AP000593.1-201ENST00000393668 712 ntBASIC20.31■□□□□ 0.84
GPC3P51654 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
GPC3P51654 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 CHCHD2P8-201ENST00000429873 447 ntBASIC20.31■□□□□ 0.84
GPC3P51654 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms