Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21■□□□□ 0.95
CLCN1P35523 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21■□□□□ 0.95
CLCN1P35523 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21■□□□□ 0.95
CLCN1P35523 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLCN1P35523 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 AL121761.2-201ENST00000598007 1648 ntBASIC21■□□□□ 0.95
CLCN1P35523 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21■□□□□ 0.95
CLCN1P35523 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLCN1P35523 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN1P35523 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLCN1P35523 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.99■□□□□ 0.95
CLCN1P35523 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN1P35523 SOX15-203ENST00000570788 1093 ntBASIC20.99■□□□□ 0.95
CLCN1P35523 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN1P35523 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.99■□□□□ 0.95
CLCN1P35523 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN1P35523 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CLCN1P35523 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCN1P35523 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CLCN1P35523 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLCN1P35523 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CLCN1P35523 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLCN1P35523 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLCN1P35523 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN1P35523 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLCN1P35523 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCN1P35523 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CLCN1P35523 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLCN1P35523 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.97■□□□□ 0.95
CLCN1P35523 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCN1P35523 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLCN1P35523 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.97■□□□□ 0.95
CLCN1P35523 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCN1P35523 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLCN1P35523 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCN1P35523 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCN1P35523 AC138028.4-201ENST00000564984 1845 ntBASIC20.97■□□□□ 0.95
CLCN1P35523 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN1P35523 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.96■□□□□ 0.95
CLCN1P35523 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN1P35523 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCN1P35523 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.96■□□□□ 0.95
CLCN1P35523 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms