Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRNA1P02708 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHRNA1P02708 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.03■□□□□ 0.8
CHRNA1P02708 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRNA1P02708 MIR5100-201ENST00000579544 119 ntBASIC20.03■□□□□ 0.8
CHRNA1P02708 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRNA1P02708 TP73-AS1-207ENST00000624167 988 ntBASIC20.03■□□□□ 0.8
CHRNA1P02708 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.03■□□□□ 0.8
CHRNA1P02708 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHRNA1P02708 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA1P02708 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHRNA1P02708 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA1P02708 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA1P02708 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHRNA1P02708 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHRNA1P02708 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.02■□□□□ 0.8
CHRNA1P02708 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.02■□□□□ 0.8
CHRNA1P02708 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA1P02708 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.02■□□□□ 0.8
CHRNA1P02708 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.02■□□□□ 0.8
CHRNA1P02708 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHRNA1P02708 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA1P02708 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 MYLKP1-201ENST00000509077 1580 ntBASIC20.02■□□□□ 0.8
CHRNA1P02708 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA1P02708 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA1P02708 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
CHRNA1P02708 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CHRNA1P02708 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.02■□□□□ 0.79
CHRNA1P02708 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA1P02708 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA1P02708 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CHRNA1P02708 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.02■□□□□ 0.79
CHRNA1P02708 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA1P02708 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHRNA1P02708 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.01■□□□□ 0.79
CHRNA1P02708 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 AL024508.2-201ENST00000607749 1894 ntBASIC20.01■□□□□ 0.79
CHRNA1P02708 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.01■□□□□ 0.79
CHRNA1P02708 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.01■□□□□ 0.79
CHRNA1P02708 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA1P02708 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA1P02708 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
CHRNA1P02708 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20■□□□□ 0.79
CHRNA1P02708 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA1P02708 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHRNA1P02708 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms