Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC3P02656 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC3P02656 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
APOC3P02656 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC3P02656 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC3P02656 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 NORAD-201ENST00000565493 5339 ntBASIC14.87□□□□□ -0.03
APOC3P02656 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC3P02656 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOC3P02656 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC3P02656 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 REXO1L9P-201ENST00000604264 2108 ntBASIC14.87□□□□□ -0.03
APOC3P02656 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 AL662844.4-201ENST00000606367 2838 ntBASIC14.87□□□□□ -0.03
APOC3P02656 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOC3P02656 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOC3P02656 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC3P02656 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 AC106886.4-201ENST00000623557 2502 ntBASIC14.87□□□□□ -0.03
APOC3P02656 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOC3P02656 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC3P02656 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
APOC3P02656 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC3P02656 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC3P02656 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.86□□□□□ -0.03
APOC3P02656 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
APOC3P02656 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
APOC3P02656 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC3P02656 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APOC3P02656 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.85□□□□□ -0.03
APOC3P02656 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
APOC3P02656 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
APOC3P02656 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.85□□□□□ -0.03
APOC3P02656 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 KRT8P17-201ENST00000453110 1448 ntBASIC14.85□□□□□ -0.03
APOC3P02656 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.85□□□□□ -0.03
APOC3P02656 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
APOC3P02656 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APOC3P02656 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 GPX1-201ENST00000419349 1106 ntBASIC14.85□□□□□ -0.03
APOC3P02656 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.85□□□□□ -0.03
APOC3P02656 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC3P02656 SMUG1P1-201ENST00000590640 811 ntBASIC14.85□□□□□ -0.03
APOC3P02656 AC129492.7-201ENST00000622992 756 ntBASIC14.85□□□□□ -0.03
APOC3P02656 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
APOC3P02656 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
APOC3P02656 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms