Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 KRT18P21-201ENST00000515767 1272 ntBASIC19.84■□□□□ 0.77
HLA-DRAP01903 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRAP01903 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 AK4P3-201ENST00000418260 669 ntBASIC19.83■□□□□ 0.77
HLA-DRAP01903 TMPOP1-202ENST00000424642 1267 ntBASIC19.83■□□□□ 0.77
HLA-DRAP01903 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DRAP01903 AC009065.1-201ENST00000564055 1225 ntBASIC19.83■□□□□ 0.77
HLA-DRAP01903 AC020763.4-201ENST00000623414 4170 ntBASIC19.83■□□□□ 0.76
HLA-DRAP01903 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HLA-DRAP01903 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.83■□□□□ 0.76
HLA-DRAP01903 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.83■□□□□ 0.76
HLA-DRAP01903 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HLA-DRAP01903 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DRAP01903 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.76
HLA-DRAP01903 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 RNF152P1-201ENST00000397754 604 ntBASIC19.82■□□□□ 0.76
HLA-DRAP01903 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 NEFHP1-201ENST00000412845 2629 ntBASIC19.82■□□□□ 0.76
HLA-DRAP01903 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DRAP01903 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRAP01903 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 TSPY5P-201ENST00000426936 936 ntBASIC19.81■□□□□ 0.76
HLA-DRAP01903 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.81■□□□□ 0.76
HLA-DRAP01903 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DRAP01903 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRAP01903 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms