Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLPTM1O96005 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPTM1O96005 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPTM1O96005 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 AC138028.4-201ENST00000564984 1845 ntBASIC17.42■□□□□ 0.38
CLPTM1O96005 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.42■□□□□ 0.38
CLPTM1O96005 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.42■□□□□ 0.38
CLPTM1O96005 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLPTM1O96005 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
CLPTM1O96005 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 KRT18P6-201ENST00000555540 1265 ntBASIC17.42■□□□□ 0.38
CLPTM1O96005 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLPTM1O96005 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.42■□□□□ 0.38
CLPTM1O96005 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.42■□□□□ 0.38
CLPTM1O96005 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1O96005 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 AL162727.3-201ENST00000635661 2787 ntBASIC17.41■□□□□ 0.38
CLPTM1O96005 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1O96005 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1O96005 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1O96005 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.41■□□□□ 0.38
CLPTM1O96005 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1O96005 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1O96005 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1O96005 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1O96005 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1O96005 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1O96005 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1O96005 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1O96005 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1O96005 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPTM1O96005 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPTM1O96005 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPTM1O96005 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPTM1O96005 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.4■□□□□ 0.38
CLPTM1O96005 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPTM1O96005 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CLPTM1O96005 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CLPTM1O96005 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1O96005 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms