Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 AC009065.1-201ENST00000564055 1225 ntBASIC18.36■□□□□ 0.53
PRAMEF1O95521 AL441883.1-201ENST00000566170 1045 ntBASIC18.36■□□□□ 0.53
PRAMEF1O95521 MIR3180-4-201ENST00000582223 153 ntBASIC18.36■□□□□ 0.53
PRAMEF1O95521 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF1O95521 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF1O95521 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 AC009102.3-201ENST00000623118 1491 ntBASIC18.35■□□□□ 0.53
PRAMEF1O95521 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 AC011558.1-201ENST00000623459 338 ntBASIC18.35■□□□□ 0.53
PRAMEF1O95521 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF1O95521 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF1O95521 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 MIR149-201ENST00000384879 89 ntBASIC18.34■□□□□ 0.53
PRAMEF1O95521 TMPOP1-202ENST00000424642 1267 ntBASIC18.34■□□□□ 0.53
PRAMEF1O95521 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 KRT18P21-201ENST00000515767 1272 ntBASIC18.34■□□□□ 0.53
PRAMEF1O95521 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF1O95521 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF1O95521 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms