Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.45■□□□□ 0.06
ABCA1O95477 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.45■□□□□ 0.06
ABCA1O95477 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.45■□□□□ 0.06
ABCA1O95477 AC079602.3-201ENST00000623931 403 ntBASIC15.45■□□□□ 0.06
ABCA1O95477 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.45■□□□□ 0.06
ABCA1O95477 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.44■□□□□ 0.06
ABCA1O95477 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.44■□□□□ 0.06
ABCA1O95477 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
ABCA1O95477 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.44■□□□□ 0.06
ABCA1O95477 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
ABCA1O95477 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.44■□□□□ 0.06
ABCA1O95477 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.44■□□□□ 0.06
ABCA1O95477 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.44■□□□□ 0.06
ABCA1O95477 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 AC117500.6-201ENST00000624871 588 ntBASIC15.44■□□□□ 0.06
ABCA1O95477 AF228730.7-201ENST00000641842 219 ntBASIC15.44■□□□□ 0.06
ABCA1O95477 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.44■□□□□ 0.06
ABCA1O95477 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ABCA1O95477 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ABCA1O95477 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.43■□□□□ 0.06
ABCA1O95477 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.43■□□□□ 0.06
ABCA1O95477 AC233702.3-201ENST00000578656 1387 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 MIR3180-5-201ENST00000583743 153 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
ABCA1O95477 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
ABCA1O95477 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 AL773604.1-201ENST00000617417 272 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 Z83836.1-201ENST00000624605 1642 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ABCA1O95477 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.43■□□□□ 0.06
ABCA1O95477 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.43■□□□□ 0.06
ABCA1O95477 LINC01711-201ENST00000598340 967 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ABCA1O95477 AC138894.3-201ENST00000603787 634 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 AL121772.3-201ENST00000610840 674 ntBASIC15.43■□□□□ 0.06
ABCA1O95477 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ABCA1O95477 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ABCA1O95477 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ABCA1O95477 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.42■□□□□ 0.06
ABCA1O95477 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.42■□□□□ 0.06
ABCA1O95477 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.42■□□□□ 0.06
ABCA1O95477 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.42■□□□□ 0.06
ABCA1O95477 AC112497.1-201ENST00000624824 639 ntBASIC15.42■□□□□ 0.06
ABCA1O95477 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
ABCA1O95477 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
ABCA1O95477 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ABCA1O95477 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ABCA1O95477 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ABCA1O95477 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
ABCA1O95477 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ABCA1O95477 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms