Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VAPBO95292 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
VAPBO95292 HTR7P1-202ENST00000624664 4411 ntBASIC18.56■□□□□ 0.56
VAPBO95292 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 BCL2-203ENST00000589955 5011 ntBASIC18.56■□□□□ 0.56
VAPBO95292 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 TSPY17P-201ENST00000450329 467 ntBASIC18.56■□□□□ 0.56
VAPBO95292 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.56■□□□□ 0.56
VAPBO95292 AL353719.1-201ENST00000566847 864 ntBASIC18.56■□□□□ 0.56
VAPBO95292 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.56■□□□□ 0.56
VAPBO95292 AL133373.2-201ENST00000623187 2828 ntBASIC18.56■□□□□ 0.56
VAPBO95292 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VAPBO95292 AC099343.3-201ENST00000605834 2503 ntBASIC18.56■□□□□ 0.56
VAPBO95292 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.55■□□□□ 0.56
VAPBO95292 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
VAPBO95292 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.55■□□□□ 0.56
VAPBO95292 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 KRT8P50-201ENST00000562022 1438 ntBASIC18.55■□□□□ 0.56
VAPBO95292 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VAPBO95292 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VAPBO95292 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 NOC2LP1-202ENST00000452600 2235 ntBASIC18.54■□□□□ 0.56
VAPBO95292 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VAPBO95292 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 CCR12P-201ENST00000446203 998 ntBASIC18.54■□□□□ 0.56
VAPBO95292 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.54■□□□□ 0.56
VAPBO95292 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.54■□□□□ 0.56
VAPBO95292 MIR4497-201ENST00000583208 89 ntBASIC18.54■□□□□ 0.56
VAPBO95292 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
VAPBO95292 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.54■□□□□ 0.56
VAPBO95292 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 PCDHB18P-201ENST00000524813 2368 ntBASIC18.54■□□□□ 0.56
VAPBO95292 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.54■□□□□ 0.56
VAPBO95292 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VAPBO95292 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.53■□□□□ 0.56
VAPBO95292 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 ESPNP-201ENST00000270691 2015 ntBASIC18.53■□□□□ 0.56
VAPBO95292 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VAPBO95292 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VAPBO95292 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
VAPBO95292 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.53■□□□□ 0.56
VAPBO95292 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.53■□□□□ 0.56
VAPBO95292 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.53■□□□□ 0.56
VAPBO95292 AC092338.2-201ENST00000568827 1415 ntBASIC18.53■□□□□ 0.56
VAPBO95292 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.53■□□□□ 0.56
VAPBO95292 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.53■□□□□ 0.56
VAPBO95292 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.53■□□□□ 0.56
VAPBO95292 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms