Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UPK1BO75841 AC019069.1-201ENST00000610008 1333 ntBASIC16.1■□□□□ 0.17
UPK1BO75841 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UPK1BO75841 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 AC068418.2-201ENST00000577309 3703 ntBASIC16.09■□□□□ 0.17
UPK1BO75841 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UPK1BO75841 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1BO75841 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UPK1BO75841 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1BO75841 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK1BO75841 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK1BO75841 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1BO75841 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK1BO75841 CROCCP1-201ENST00000426910 5675 ntBASIC16.08■□□□□ 0.17
UPK1BO75841 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
UPK1BO75841 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.08■□□□□ 0.17
UPK1BO75841 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
UPK1BO75841 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.08■□□□□ 0.17
UPK1BO75841 AL096828.2-201ENST00000567259 1965 ntBASIC16.08■□□□□ 0.16
UPK1BO75841 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.08■□□□□ 0.16
UPK1BO75841 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.08■□□□□ 0.16
UPK1BO75841 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.08■□□□□ 0.16
UPK1BO75841 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 AC105020.6-201ENST00000621523 1217 ntBASIC16.08■□□□□ 0.16
UPK1BO75841 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.08■□□□□ 0.16
UPK1BO75841 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.08■□□□□ 0.16
UPK1BO75841 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.08■□□□□ 0.16
UPK1BO75841 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1BO75841 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1BO75841 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UPK1BO75841 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
UPK1BO75841 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UPK1BO75841 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
UPK1BO75841 IRS3P-201ENST00000223076 1006 ntBASIC16.07■□□□□ 0.16
UPK1BO75841 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 AC009299.2-201ENST00000482477 511 ntBASIC16.07■□□□□ 0.16
UPK1BO75841 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.07■□□□□ 0.16
UPK1BO75841 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
UPK1BO75841 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UPK1BO75841 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.07■□□□□ 0.16
UPK1BO75841 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms