Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS3O75489 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS3O75489 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS3O75489 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
NDUFS3O75489 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS3O75489 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS3O75489 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS3O75489 KRT8P50-201ENST00000562022 1438 ntBASIC18.4■□□□□ 0.54
NDUFS3O75489 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFS3O75489 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFS3O75489 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.4■□□□□ 0.54
NDUFS3O75489 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFS3O75489 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.4■□□□□ 0.54
NDUFS3O75489 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NDUFS3O75489 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NDUFS3O75489 INGX-201ENST00000359239 846 ntBASIC18.4■□□□□ 0.54
NDUFS3O75489 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.4■□□□□ 0.54
NDUFS3O75489 KRT18P23-201ENST00000435622 1283 ntBASIC18.4■□□□□ 0.54
NDUFS3O75489 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.4■□□□□ 0.54
NDUFS3O75489 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 BICD1-207ENST00000551848 1962 ntBASIC18.4■□□□□ 0.54
NDUFS3O75489 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS3O75489 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS3O75489 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS3O75489 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS3O75489 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS3O75489 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.54
NDUFS3O75489 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.39■□□□□ 0.53
NDUFS3O75489 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.39■□□□□ 0.53
NDUFS3O75489 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.39■□□□□ 0.53
NDUFS3O75489 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
NDUFS3O75489 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NDUFS3O75489 KRT8P7-201ENST00000533003 1432 ntBASIC18.39■□□□□ 0.53
NDUFS3O75489 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS3O75489 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.39■□□□□ 0.53
NDUFS3O75489 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDUFS3O75489 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NDUFS3O75489 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS3O75489 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS3O75489 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFS3O75489 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS3O75489 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS3O75489 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.38■□□□□ 0.53
NDUFS3O75489 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDUFS3O75489 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDUFS3O75489 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS3O75489 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NDUFS3O75489 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS3O75489 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS3O75489 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NDUFS3O75489 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS3O75489 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NDUFS3O75489 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms