Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH16O75309 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH16O75309 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH16O75309 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDH16O75309 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH16O75309 RCC2P3-201ENST00000418112 1537 ntBASIC18.65■□□□□ 0.58
CDH16O75309 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 AL096828.2-201ENST00000567259 1965 ntBASIC18.65■□□□□ 0.58
CDH16O75309 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH16O75309 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.65■□□□□ 0.58
CDH16O75309 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH16O75309 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH16O75309 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDH16O75309 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH16O75309 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.64■□□□□ 0.58
CDH16O75309 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH16O75309 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH16O75309 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH16O75309 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH16O75309 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
CDH16O75309 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CDH16O75309 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH16O75309 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CDH16O75309 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH16O75309 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH16O75309 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDH16O75309 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH16O75309 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH16O75309 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH16O75309 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH16O75309 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH16O75309 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH16O75309 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CDH16O75309 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH16O75309 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH16O75309 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms