Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
OPHN1O60890 AP000550.4-202ENST00000639755 178 ntBASIC19.26■□□□□ 0.67
OPHN1O60890 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OPHN1O60890 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.26■□□□□ 0.67
OPHN1O60890 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.26■□□□□ 0.67
OPHN1O60890 AC007613.1-201ENST00000572811 2597 ntBASIC19.26■□□□□ 0.67
OPHN1O60890 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.25■□□□□ 0.67
OPHN1O60890 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
OPHN1O60890 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.25■□□□□ 0.67
OPHN1O60890 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 KRT8P32-201ENST00000512863 1461 ntBASIC19.25■□□□□ 0.67
OPHN1O60890 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.25■□□□□ 0.67
OPHN1O60890 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 TPM4P1-201ENST00000436100 807 ntBASIC19.25■□□□□ 0.67
OPHN1O60890 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.25■□□□□ 0.67
OPHN1O60890 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.25■□□□□ 0.67
OPHN1O60890 AP000692.2-201ENST00000608391 879 ntBASIC19.25■□□□□ 0.67
OPHN1O60890 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.25■□□□□ 0.67
OPHN1O60890 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.25■□□□□ 0.67
OPHN1O60890 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.25■□□□□ 0.67
OPHN1O60890 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPHN1O60890 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.25■□□□□ 0.67
OPHN1O60890 AC005332.8-201ENST00000622750 2735 ntBASIC19.24■□□□□ 0.67
OPHN1O60890 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.24■□□□□ 0.67
OPHN1O60890 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.24■□□□□ 0.67
OPHN1O60890 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 TSPY5P-201ENST00000426936 936 ntBASIC19.24■□□□□ 0.67
OPHN1O60890 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.24■□□□□ 0.67
OPHN1O60890 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
OPHN1O60890 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.24■□□□□ 0.67
OPHN1O60890 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 AL121894.2-201ENST00000602977 491 ntBASIC19.24■□□□□ 0.67
OPHN1O60890 AC068587.9-201ENST00000641814 219 ntBASIC19.24■□□□□ 0.67
OPHN1O60890 FZD10-202ENST00000539839 3282 ntBASIC19.24■□□□□ 0.67
OPHN1O60890 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.24■□□□□ 0.67
OPHN1O60890 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.24■□□□□ 0.67
OPHN1O60890 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
OPHN1O60890 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPHN1O60890 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.24■□□□□ 0.67
OPHN1O60890 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
OPHN1O60890 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
OPHN1O60890 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.23■□□□□ 0.67
OPHN1O60890 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 KRT18P48-201ENST00000434763 852 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 AC009947.2-201ENST00000444014 672 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 COX11P1-201ENST00000489116 835 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 YBX1P2-201ENST00000489612 999 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.23■□□□□ 0.67
OPHN1O60890 AC090164.3-201ENST00000610780 2143 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 AL138966.2-201ENST00000621997 464 ntBASIC19.23■□□□□ 0.67
OPHN1O60890 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.23■□□□□ 0.67
OPHN1O60890 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.23■□□□□ 0.67
OPHN1O60890 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
OPHN1O60890 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
OPHN1O60890 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPHN1O60890 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms